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Publications using the System 3

641 published studies used the System 3.

Materials Today Bio · Oct 2026

A viscosity-tunable microgel-in-sol phase for localized inner ear delivery of small hydrophilic drug (opens in a new tab)

Sumin Kim, Jee Hyun Kang, Seong Su Won, … Mikyung Shin

System 3ABR/DPOAE
Abstract

Cisplatin-induced ototoxicity leads to irreversible hearing loss in approximately 50% of treated patients, largely due to the cochlea's exceptionally poor cisplatin clearance compared with other organs. Although sodium thiosulfate (STS), a hydrophilic small molecule, is an established otoprotectant, achieving therapeutically sufficient cochlear concentrations remains challenging because systemic administration is limited by the blood-labyrinth barrier. Here, we report a viscosity-tunable microgel-in-sol system based on hyaluronic acid (HA) that enables sustained, localized delivery of STS to the inner ear via intratympanic injection. The STS-loaded microgel was readily injectable through 31 G needles and provided a six-fold extension in drug release duration compared with free STS solution. However, direct microgel injection caused significant occlusion of the middle ear cavity due to swelling and poor clearance. To overcome this limitation, we developed a microgel-in-sol formulation composed of an HA solution and microgel at a 3:1 volumetric ratio. This formulation exhibited concentration-dependent, lubricant-like viscosity while maintaining effective drug delivery and preserving auditory function, as confirmed by in vivo auditory brainstem response (ABR) measurements. Overall, this microgel-in-sol strategy represents a biocompatible, minimally invasive approach for localized inner-ear drug delivery.

Journal of Biological Chemistry · Oct 2026

Hearing loss associated with CDC42 in mice and humans (Takenouchi-Kosaki syndrome): CDC42 and RHOQ synergistically function in cochlear hair cells (opens in a new tab)

Takehiko Ueyama, Akira Ganaha, Shunkou Kurasawa, … Hirofumi Sakaguchi

System 3BioSigABR/DPOAE
Abstract

CDC42 is involved in multiple signaling pathways, including actin organization and polarity. We previously reported progressive sensorineural hearing loss (SNHL) in inner ear hair cell (HC)-specific Cdc42-knockout (Atoh1-Cre+/-;Cdc42flox/flox) mice. However, the phenotype was milder than expected, suggesting possible redundancy with other Rho-family GTPases. Thereafter, Takenouchi-Kosaki syndrome (TKS), caused by de novo CDC42 mutations and manifesting as SNHL, was reported, in which the p.Y64C mutation was speculated to be constitutively active. However, the relationship between CDC42 status and hearing phenotypes in TKS remains unclear. Using cell models, mouse models, and patient data, we propose that impaired and/or dysregulated cycling between GDP/inactive and GTP/active forms, through either loss-of-function or constitutive activation, can lead to SNHL. Furthermore, to test redundancy, we generated HC-specific Cdc42;RhoQ double-knockout (Atoh1-Cre+/-;Cdc42flox/flox;RhoQflox/flox) mice, which revealed synergistic roles of CDC42 and RHOQ in cochlear HCs. Supporting this synergy, MDCK cells with CDC42 and RHOQ double knockdown showed greater phospho-cofilin, a key regulator of actin turnover, elevation than single knockdowns.

PLOS One · Sep 2026

Otoprotective effect of MnTBAP in cisplatin-induced hearing loss (opens in a new tab)

Shomaila Mehmood, Pankaj Bhatia, Samson Jamesdaniel

Abstract

Objective Cisplatin, a life-saving chemotherapeutic drug, causes ototoxicity. Although sodium thiosulfate is used to prevent ototoxicity in pediatric patients, no other intervention has been approved for clinical use against cisplatin-induced hearing loss. Hence, there is an urgent need to identify drugs that prevent cisplatin ototoxicity. Methods CBA/J mice were treated with cisplatin (3 mg/kg, i.p., daily for 5 days), and MnTBAP (10 mg/kg, i.p., daily for 8 days) was used to inhibit cisplatin-induced ototoxicity. Auditory brainstem responses (ABRs) and distortion product otoacoustic emissions (DPOAEs) were recorded before and after treatment to assess hearing loss, while immunohistochemistry with anti-Myosin-VIIa was conducted to examine hair cell loss, with phalloidin to examine spiral ganglion neuron (SGN) loss, and with anti-nitrotyrosine to assess nitrotyrosine levels. Results Cisplatin treatment elevated the nitrotyrosine levels in hair cells and SGNs and increased the loss of these cells in the middle and basal cochlear regions. A negative correlation was observed between cisplatin-induced changes in the hair cell count or SGN density and nitrotyrosine levels. Cisplatin treatment elevated the hearing thresholds, as indicated by the ABRs, and lowered the DPOAE amplitudes, suggesting cisplatin-induced hearing loss. However, MnTBAP cotreatment prevented the cisplatin-induced changes in hearing sensitivity and reversed the morphological changes. Conclusion The otoprotection observed with MnTBAP cotreatment along with the attenuation of cisplatin-induced increase in nitrotyrosine levels in the cochlea indicates its potential as an inhibitor of cochlear nitrative stress and its utility in mitigating cisplatin-induced ototoxicity.

Journal of Experimental Biology · Sep 2026

Song recognition in Floridian Ormia ochracea reflects multidimensional temporal tuning (opens in a new tab)

Lauren J. Bitner, Jimena A. Dominguez, Luke Bemish, … Norman Lee

Abstract

Acoustic communication signals often contain a complex temporal structure, yet how this temporal structure contributes to signal recognition is poorly understood, particularly in eavesdropping receivers. The parasitoid fly Ormia ochracea localises host crickets by eavesdropping on their calling songs. In Florida, preferred host songs consist of sound pulses repeated at ∼50 pulses s−1, and flies exhibit matching preferences. However, it is unclear whether this preference reflects sensitivity to individual temporal parameters or to derived temporal relationships that emerge from their combination. We independently varied pulse duration and interpulse interval across a broad stimulus space and quantified tethered-walking phonotaxis using a switch-following paradigm. Behavioural responses formed a structured tuning surface, with elevated responses for pulse durations of ∼5–15 ms across a broad range of interpulse intervals, together with high performance along a diagonal corresponding to 50 pulses s−1. Responses failed to collapse across stimuli sharing the same pulse rate or pulse period, indicating that these parameters alone do not determine recognition. Models allowing behavioural responses to vary jointly across combinations of temporal parameters substantially outperformed models based on single parameters. Although pulse duration strongly constrained recognition, behavioural responses also varied systematically with interpulse interval and could not be explained by pulse duration, interpulse interval, pulse rate, pulse period or duty cycle alone. The apparent preference of O. ochracea for ∼50 pulses s−1 therefore represents one component of a broader temporal recognition landscape rather than recognition based on pulse rate alone.

bioRxiv · Sep 2026

High-Frequency Focused Ultrasound targeting the midbrain in the Guinea Pig Induces Activation and Plasticity of the Efferent System, and Protection Against Noise-Induced Hearing Loss (opens in a new tab)

Vinay Parameshwarappa, Guillaume Rastoldo, Emilie Franceschini, … Arnaud Norena

Abstract

Focused ultrasound (FUS) is a promising noninvasive neuromodulation approach, but whether it can directly activate central auditory neurons in vivo remains unresolved. We applied high-frequency FUS (20 MHz) to the central nucleus of the inferior colliculus (CNIC) in anesthetized guinea pigs while recording electrophysiological responses from the auditory pathway and cochlea. FUS evoked cortical activity through indirect cochlear activation, possibly via skull-mediated mechanical coupling, rather than direct inferior colliculus activation, with ultrasound-evoked compound action potentials predominating in the ipsilateral cochlea. More interestingly, FUS stimulation of the CNIC induced activation of neurons and glial cells in the CNIC and auditory cortex as demonstrated by c-Fos expression, suggesting that FUS stimulation activated the afferent pathway. We also show that FUS engaged the auditory efferent system, likely via medial olivocochlear neurons, producing reduced compound action potential amplitudes, enhanced cochlear microphonics, and persistent effects lasting at least two hours, consistent with long-lasting efferent plasticity. Strikingly, FUS administered before acoustic trauma almost completely prevented noise-induced hearing loss, limiting auditory brainstem response threshold shifts to <10 dB versus ∼60 dB in controls. Gentamicin abolished these physiological and protective effects, implicating medial olivocochlear activation. These findings identify FUS as a potent noninvasive strategy for engaging auditory efferent circuits and protecting against acoustic injury.

bioRxiv · Sep 2026

Validating the Gap-Startle Paradigm for Tinnitus Detection: A Machine Learning Approach in CBA/CaJ Mice (opens in a new tab)

Alyssa B. Price, Dimitri L. Brunelle, Collin R. Park, … Joseph P. Walton

Abstract

Tinnitus is one of the most common hearing disorders affecting one-third of Americans and is defined as the buzzing or ringing sound one perceives in one or both ears in the absence of an acoustic stimulus. One objective method for tinnitus screening in rodents is gap prepulse inhibition of the acoustic startle reflex (GPIAS), a reduction in the abrupt motor response elicited by an intense auditory stimulus following a silent gap in noise. Reduced inhibition by gaps embedded in narrow-band noise is hypothesized to reflect the primary tinnitus pitch, as the tinnitus “fills-in” the gap. However, Lobarinas et al. (2013) identified a critical limitation: after acoustic trauma or hearing loss, rodents often exhibit markedly diminished acoustic startle reflexes, creating a “floor effect” where further suppression becomes undetectable even if gap perception remains intact, leading to false-positive tinnitus screening results. To address this limitation, we utilized the CBA/CaJ mouse model to assess tactile airpuff modification efficacy and employed a machine learning algorithm to classify startle responses, achieving 98% accuracy in differentiating startles from non-startles. We induced unilateral conductive hearing loss via ear plugging and found enhanced gap detection ability, contrasting with false-positive tinnitus indicators observed in rats by Lobarinas and colleagues. We also pharmacologically induced tinnitus via sodium salicylate, revealing frequency-specific alterations in gap detection patterns. Our findings suggest that differences in data analysis methodology, specifically using a machine learning algorithm to filter non-startle responses, may explain species-specific differences between mouse and rat models and significantly improve GPIAS validity as a tinnitus screening assessment tool. Highlights • Gap-startle paradigm objectively screens for tinnitus in rodent models. • Machine learning classification achieved 98% accuracy in startle detection. • Enhanced analysis resolved floor effects that previously limited paradigm validity. • Species differences explained by improved data filtering methodology.

JCI Insight · Aug 2026

Heat-shock pathway activation by TRC051384 protects spiral ganglion neurons from noise-induced hearing loss (opens in a new tab)

Jintao Yu, Miguel A. Ramirez, Yi-Zhi Wang, … Jeffrey N. Savas

Abstract

Noise-induced hearing loss (NIHL) is a major public health problem caused by damage to cochlear hair cells, synapses, and spiral ganglion neurons (SGNs). Since effective treatments are lacking, we investigated cellular stress responses induced by moderate and loud noise in a mouse model of cochlear synaptopathy. RNA sequencing and spatial transcriptomics revealed that noise exposure elicited a robust but transient upregulation of endoplasmic reticulum chaperones and proteasome subunits in SGNs and their supporting cells. To target this response, we administered TRC051384, a small-molecule activator of the heat shock transcription factor Hsf1, prior to noise exposure. TRC051384 crossed the blood–labyrinth barrier and reached the cochlea, induced heat shock protein gene expression, and restored ubiquitin–proteasome function in SGNs. Notably, TRC051384 treatment enhanced auditory brainstem response threshold recovery, preserved Wave I amplitudes, and maintained ribbon synapse density. Together with the existing literature, these findings identify proteotoxic stress in spiral ganglion neurons as a contributor to noise-induced hearing loss and support pharmacological activation of HSF1 as a promising therapeutic strategy.

Frontiers in Pharmacology · Aug 2026

MCU knockdown attenuates cisplatin-induced damage of auditory cells: potential involvement of PI3K/AKT/mTOR signaling and autophagy-related processes (opens in a new tab)

Yue Xu, Yang Li, Jie Mao, … Rongjun Man

System 3ABR/DPOAE
Abstract

Introduction The mitochondrial calcium uniporter (MCU) mediates mitochondrial Ca 2⁺ uptake, but its involvement in cisplatin-induced ototoxicity remains poorly understood. We investigated MCU expression and its association with cisplatin-induced injury in mouse cochlear basilar membranes and HEI-OC1 cells. Methods MCU protein abundance and localization were assessed by Western blotting and immunofluorescence. MCU expression was genetically reduced by lentiviral knockdown, and Ru360 was used as a pharmacological intervention. Apoptosis-related proteins and transcriptomic changes were evaluated. An acute cisplatin-induced ototoxicity model was established in C57BL/6 mice and assessed using auditory brainstem response (ABR) measurements and outer hair cell counts. Results Cisplatin increased MCU expression and reduced SERCA2 expression; the cisplatin-induced increase in MCU was partially reversed by BAPTA-AM and the endoplasmic reticulum stress inhibitor 4-PBA. MCU knockdown did not affect basal cell viability but attenuated cisplatin-induced reductions in viability, TUNEL positivity, and cleaved caspase-3. It was also associated with increased SERCA2 and decreased IP3R, GRP75, and VDAC1 expression. RNA sequencing identified differentially expressed genes enriched in autophagy-related processes and mTOR signaling. MCU knockdown was associated with increased PI3K/AKT/mTOR signaling and changes in Beclin1, LC3B-II, and p62. Ru360 cotreatment partially reproduced the protective phenotype in vitro and was associated with attenuated ABR threshold elevation at selected frequencies and reduced outer hair cell loss in vivo . Discussion These findings support an association between MCU-related signaling, PI3K/AKT/mTOR pathway activation, altered autophagy-related markers, and reduced cisplatin-induced cochlear injury.

Genes · Aug 2026

FOXA2 Transcriptionally Activates SIRT1 to Inhibit Cochlear Ferroptosis in Noise-Induced Hearing Loss (opens in a new tab)

Xiaoru Dai, Peng Sun, Minyun Jiang, … Boshen Wang

System 3ABR/DPOAE
Abstract

Background: Noise-induced hearing loss (NIHL) is a pervasive occupational health challenge, yet the individual susceptibility mechanisms remain unclear. Ferroptosis, an iron-dependent form of programmed cell death, has been implicated in cochlear hair cell damage. This study aims to elucidate the regulatory role of the transcription factor FOXA2 and the deacetylase SIRT1 in ferroptosis and to investigate the association between SIRT1 genetic polymorphisms and NIHL susceptibility in occupational populations. Methods: We employed a multi-level study design combining epidemiological investigation, animal models, and cellular experiments. First, a case–control study was conducted involving 1314 noise-exposed workers (639 cases vs. 675 controls) from a chemical fiber enterprise in Jiangsu Province to analyze the association between SIRT1 single nucleotide polymorphisms (SNPs) and NIHL risk. Second, a C57BL/6J mouse model exposed to 120 dB white noise was established to assess cochlear morphology and protein expression. Third, in HEI-OC1 cochlear hair cells, we performed siRNA-mediated knockdown of Foxa2 and dual-luciferase reporter assays to verify the transcriptional regulation of SIRT1 and its downstream effects on the ferroptosis pathway. Results: Population analysis revealed that the SIRT1 rs12778366 C allele was significantly associated with increased NIHL risk (OR = 1.386, 95% CI: 1.084–1.772, p = 0.009), and this association remained significant after adjustment (p = 0.041). Stratified analysis further revealed a significant gene–environment interaction in workers with >15 years of noise exposure (OR = 2.126, 95% CI: 1.401–3.226, p < 0.001). In vivo, noise exposure led to significant downregulation of Sirt1 and Foxa2 in cochlear tissues, accompanied by elevated ferroptosis markers (Fe2+, MDA) and depleted antioxidant defenses (GSH, xCT, and GPX4). Mechanistically, we demonstrate that FOXA2 transcriptionally activates SIRT1 by binding to its promoter. Knockdown of FOXA2 in vitro suppressed SIRT1 expression, suppressed xCT, a key component of the System Xc−/GPX4 antioxidant axis, and promoted ferroptosis-related cellular changes. Conclusions: This study identifies a novel protective axis where FOXA2 prevents noise-induced ferroptosis in cochlear hair cells by transcriptionally upregulating SIRT1 and maintaining xCT-mediated antioxidant defense. Furthermore, the SIRT1 rs12778366 polymorphism is identified as a candidate variant warranting further investigation in independent cohorts before clinical translation.

Frontiers in Human Neuroscience · Aug 2026

Spectrotemporal signatures of driving- and modulatory circuits across cortical and subcortical networks (opens in a new tab)

M. N. O’Connell, A. Barczak, C. A. Mackey, … C. E. Schroeder

Abstract

Introduction Sensory processing depends on interactions between neural circuits that convey and regulate information across cortical and subcortical networks. Classical frameworks distinguish driving inputs, which transmit sensory content via suprathreshold activation, from modulatory inputs, which alter neuronal excitability without directly eliciting spiking. However, physiological signatures of these circuit types that generalize widely across distributed brain regions remain unclear. Methods We functionally differentiated driving and modulatory circuits in the awake macaque brain by jointly quantifying suprathreshold multiunit activity (MUA) and oscillatory phase coherence (inter-trial coherence, ITC) across eight cortical and thalamic structures during auditory, visual, and eye-movement conditions. Results Preferred sensory stimuli elicited broadband ITC increases accompanied by robust MUA, yielding relatively uniform spectral distributions across adjacent frequency bands, consistent with driving inputs. In contrast, non-preferred sensory and eye-movement related events produced narrowband, frequency-specific ITC modulation without concurrent firing, characterized by dominant peaks at stimulation or event rates, consistent with modulatory inputs. These two response types were observed within individual regions, revealing two separable modes of neural activity. Discussion This narrowband ITC modulation is indicative of coordinated phase alignment, capable of dynamically regulating information transfer mediated by driving inputs across thalamocortical circuits. These findings identify distinct spectrotemporal signatures of driving and modulatory circuit properties across cortical and thalamic levels and demonstrate that subthreshold oscillatory modulation is a widespread phenomenon reflecting cross-modal and saccadic-related influences on neural excitability.

Journal of Neuroinflammation · Aug 2026

OMVs of Pseudomonas aeruginosa extracted from chronic suppurative otitis media trigger ototoxicity: possible relation to activation of NLRP3 inflammasome (opens in a new tab)

Junhong Zhang, Rongjun Man, Jingyi Zhao, … Zhixin Cao

Abstract

Background Chronic suppurative otitis media (CSOM) can lead to sensorineural hearing loss (SNHL), but the underlying mechanisms remain incompletely understood. This study aimed to investigate whether the outer membrane vesicles (OMVs) from Pseudomonas aeruginosa ( P.aeruginosa ), a common CSOM pathogen, can induce ototoxicity via activation of NLRP3 inflammasome. Methods A CSOM model was established in C57BL/6 mice by intratympanic injection of P.aeruginosa -derived OMVs. The pathological changes in the middle and inner ear and the activation of the NLRP3 inflammasome pathway were evaluated using cochlear tissues from model mice, together with in vitro models employing organ of Corti-derived (HEI-OC1) cells and postnatal day 4 (P4) mouse cochlear explants, through histopathological staining, immunoassays, and RNA sequencing. The protective role of the NLRP3 inhibitor MCC950 was additionally investigated. Results P. aeruginosa OMVs induced dose- and time-dependent reductions in cellular metabolic activity in the HEI-OC1 organ of Corti cell line, as well as cochlear hair cell damage and NLRP3 inflammasome activation in postnatal P4 cochlear explants. In vivo, OMV inoculation provoked CSOM and inner ear injury within 14 days, accompanied by significant hair cell loss. RNA-sequencing analysis of CSOM mouse cochleae identified 2583 differentially expressed genes, predominantly enriched in inflammatory pathways, with marked upregulation of NLRP3, Pycard, Casp1, GSDMD, and IL-1β. Treatment with MCC950 significantly alleviated inner ear inflammation, preserved cochlear morphology, reduced hair cell damage, and suppressed the expression of NLRP3, ASC, caspase-1, and GSDMD. Conclusion These findings provide evidence supporting the hypothesis that P. aeruginosa OMVs contribute to CSOM-associated cochlear damage both in vivo and in vitro, a process associated with NLRP3 inflammasome activation within the inner ear. While causality cannot be fully established, inhibition of NLRP3 signaling with MCC950 mitigated inner ear injury and suppressed pyroptosis-related effectors, implying its potential as a novel therapeutic strategy for CSOM-related SNHL.

Exploration · Jul 2026

Triggered Calcium Lightning Programs Cochlear Development (opens in a new tab)

Qiang Ma, Hai‐Peng Wang, Yu‐Meng Jiang, … Hai‐Bo Shi

Abstract

Spontaneous calcium (Ca 2+ ) waves play a critical role as internal stimuli in the early developing auditory system before the onset of sensory experiences. However, neither the spatiotemporal control of spontaneous Ca 2+ waves nor their impacts on auditory development are well understood. Here we report that a lateral array of inner supporting cells (ISCs) beneath the inner hair cells displays a spontaneous ultra‐long, ultra‐fast, transient Ca 2+ flash, termed “Ca 2+ lightning”, which triggers a series of simultaneous bursts of Ca 2+ waves in the whole cochlea, before the ear canal opening. The Ca 2+ lightning margins the cochlear ISCs at different developmental stages that correspondingly exhibit different Ca 2+ activities. Triggered by an ATP‐induced high‐level Ca 2+ wave, the Ca 2+ lightning rapidly propagates laterally into neighboring ISCs through the intricate interplay of the T‐type Ca 2+ channel, Anoctamin 1 (Ano1) Ca 2+ ‐activated Cl − channel and Connexin 26 (Cx26). The genetic deletion of Cav3.2, Ano1, or Cx26 abrogates Ca 2+ lightning flashes and dysregulates cell development and functions in peripheral cochleae. We propose that cochlear Ca 2+ lightning flashes orderly with Ca 2+ waves together orchestrate the spatiotemporal maturation processes of the peripheral auditory system before the onset of hearing.

Journal of Functional Biomaterials · Jul 2026

Drug Nanocrystal-Loaded Thermo-Reversible Hydrogels of Dexamethasone Palmitate for Intratympanic Drug Delivery (opens in a new tab)

Su Yeon Noh, Jee Hyun Kang, In Gyu Yang, … Myung Joo Kang

BioSigSystem 3ABR/DPOAE
Abstract

Intratympanic (IT) injection of corticosteroids is a standard clinical treatment for sensorineural hearing loss; however, achieving both biocompatibility and efficient cochlea drug delivery remains a significant challenge. Herein, we engineered a novel drug nanocrystal (NS)-loaded thermo-reversible hydrogel (NS-TG) system of dexamethasone-21-palmitate (DEX-P), a lipophilic prodrug of dexamethasone (DEX), for improved IT delivery. NSs with a mean diameter of 835.0 nm were fabricated using a dual centrifugation process with polyvinyl alcohol as the stabilizer. The NS-TG system, comprising NSs in a 19% (w/v) Poloxamer 407 hydrogel, exhibited rapid gelation (2–3 min) and a 31-fold increase in drug solubility (1.57 ± 0.02 mg/mL) compared to NS alone, through micellar solubilization. In vitro cytotoxicity assays in HEI-OC1 cells revealed that NS-TG is highly biocompatible, maintaining cell viability, whereas the commercial lipid emulsion (Lipothason®) induced significant cytotoxicity. In vivo pharmacokinetic evaluation in mice revealed that IT NS-TG provided superior cochlear drug absorption compared to DEX-SP solutions and DEX-P NS, despite showing lower absorption than the lipid emulsion. These findings suggest that the DEX-P NS-TG system, pending further investigation, could serve as a promising platform for cochlear steroidal delivery, offering an optimal balance between delivery efficiency and local safety for treating inner ear diseases.

Nature Communications · Jul 2026

Neuronal dynamics, timing, and flow of sensory and choice-related information in auditory-prefrontal circuitry (opens in a new tab)

Franco Giarrocco, Bruno B. Averbeck

Abstract

Auditory decision-making requires transforming sensory inputs into meaningful choices by integrating external stimuli with internal cognitive processes. Classical hierarchical models propose sequential processing, where primary sensory areas relay sensory information to higher-order regions that compute decision-related processes. However, whether this sequential hierarchy fully captures cortical dynamics remains unclear. Here, we analyzed simultaneous neuronal recordings from primary auditory cortex (A1) and dorsolateral prefrontal cortex (PFC) in two male macaque monkeys performing a spatial auditory decision-making task. Our analyses revealed a clear temporal hierarchy: sensory information was unidirectionally transferred from A1 to PFC, while decision-related information exhibited a bidirectional transfer, first from PFC to A1, and crucially back from A1 to PFC. These findings extend classical hierarchical assumptions, demonstrating a recurrent loop between A1 and PFC during decision-making, and offer a dynamic perspective on the integration of sensory and cognitive processes in the cerebral cortex.

Fundamental Research · Jul 2026

Identifying ROCK2 as an intervention target for bilirubin encephalopathy (opens in a new tab)

Bingbing Ke, Linfei Mao, Mu Hu, … Chunyan Li

Abstract

Neonatal bilirubin encephalopathy is primarily characterized by central auditory dysfunction and cognitive impairments. However, the precise molecular mechanisms underlying bilirubin-induced neurotoxicity remain poorly understood, hindering the development of effective therapeutic strategies. Using kinase activity prediction tools based on quantitative phosphoproteomics, we identified ROCK2 (Rho-associated protein kinase 2) as a critical kinase regulating the phosphorylation of proteins associated with bilirubin exposure. Molecular docking and MicroScale Thermophoresis assays revealed a strong binding affinity between bilirubin and ROCK2. Interestingly, bilirubin increased ROCK2 protein expression without affecting its mRNA levels, and cycloheximide chase assays revealed enhanced ROCK2 stability, implicating post-translational regulation. While bilirubin did not directly activate ROCK2 kinase activity in vitro, it elevated phosphorylation of its substrate LIMK1, suggesting that ROCK2 accumulation amplifies downstream signaling. In primary rat neurons, ROCK2 inhibitors (Belumosudil and Y-27632) ameliorated bilirubin-induced loss of mitochondrial membrane potential and neuronal cell death. Furthermore, using ROCK2 inhibitors and Rock2+/- mice, we demonstrated that modulation of ROCK2 significantly alleviated bilirubin-induced auditory deficits and cognitive impairments. These behavioral improvements were linked to restored excitatory synaptic transmission in the cochlear nucleus and reduced dendritic damage in hippocampal neurons. These findings position ROCK2 as a promising molecular target for therapeutic intervention in bilirubin encephalopathy.

Journal of the Association for Research in Otolaryngology · Jun 2026

Development of the Surgical Implantation and Fixation of an Implanted Middle Ear Microphone, the “UmboMic,” in Cadaveric Sheep (opens in a new tab)

Isadora C. Comens, Chaoqun Zhou, Dan L. Nguyen, … Elizabeth S. Olson

Abstract

Purpose: The UmboMic is a recently developed middle ear microphone that functions by detecting the sound-induced motion of the umbo [1]. To prepare for a live animal study of the in vivo performance of the UmboMic, we developed the surgical implantation and fixation system in cadaveric sheep ears. Methods: Temporal bones from seven female sheep were prepared for implantation of the UmboMic system. Fixation hardware for sheep was designed to secure the UmboMic sensor in position so that the sensing tip contacted the umbo in the middle-ear cavity and the non-sensing tail end was secured to the surrounding mastoid bone. First, pre-surgical micro-CT scans of the temporal bones and open-source software were used to simulate surgical drilling, and to virtually plan and fit the UmboMic fixation system. Then, in physical sheep temporal bones, sound-induced umbo motion was measured with a laser Doppler vibrometer as a preliminary step. After surgical implantation of the UmboMic system, the position of the UmboMic sensor was evaluated with microscopic visualization and post-surgical micro-CT. Implanted UmboMic sensor function in response to acoustic frequency sweeps to the external ear canal was measured in two specimens. Results: Measurements of sheep temporal bone anatomical dimensions with micro-CT showed that the facial recess featured a mean maximum height of 2.36 mm, length of 12.2 mm, and depth from outer opening surface of facial recess to the umbo of 11.1 mm. The amplitude of umbo motion prior to UmboMic implantation was consistent with that previously reported by [2], with a displacement of ~ 14 nm/Pa up to a frequency of 5.5 kHz, followed by a gradual drop-off. When bench tested and implanted in sheep temporal bones, the UmboMic sensitivity was as predicted from [1], ~ 1-2 fC/nm. Conclusion: When implanted in sheep cadaveric ears, UmboMic performance was similar to previous measurements in fresh human cadaveric temporal bones. The method of simulating surgical drilling using micro-CT and simple open-source software is economical and broadly applicable in understanding the 3D biological anatomy and implantable device design and customization. The UmboMic implantation in cadaveric sheep ears was possible, and this study represents a step towards planned live animal studies.

Cerebral Cortex · Jun 2026

Laminar architecture of visual and auditory responses in the supplementary eye field of macaques (opens in a new tab)

Pranavan Thirunavukkarasu, Steven P Errington, Amirsaman Sajad, … Jeffrey D Schall

Abstract

We describe properties and laminar organization of visual and auditory responses sampled with linear electrode arrays in and around the supplementary eye field of four macaque monkeys performing a visually guided task with a tone secondary reinforcer. Of pyramidal neurons in all layers and interneurons in L3 and L5/6, one-quarter were visually responsive, one-quarter, auditory, with 30% bimodal. Visual neurons were less common rostral, lateral, and medial to the supplementary eye field. Facilitated visual and auditory responses were much more common than suppressed. Pyramidal and interneurons responded to the stimulus in either hemifield with a weak bias for contralateral targets. Visual response latencies were comparable to values previously reported and later than auditory responses. Facilitated visual responses of interneurons preceded those of pyramidal neurons. Transient visual responses preceded sustained. Current-source density revealed visually evoked current sinks after auditory sinks that were transient for bright flashes and prolonged for the discrete task target. The earliest sink appeared at the L3 to L5 border and spread superficially and deeper with idiosyncratic variability across monkeys. These findings reveal new details about sensory processing in medial frontal cortex and complement our previous descriptions of the functional properties and laminar organization of neurons supporting cognitive control.

Biophysical Journal · Jun 2026

Active deformation in the basal organ of Corti in gerbil (opens in a new tab)

Kaitlyn H. Wong, C. Elliott Strimbu, Elizabeth S. Olson

System 3ABR/DPOAE
Abstract

Optical coherence tomography has allowed in vivo recording of sound-induced vibrations of different regions within the organ of Corti complex (OCC), including the basilar membrane (BM), outer hair cell/Deiters cell (OHC/DC) region, and reticular lamina (RL). In the hook region of the gerbil cochlea, where measurements can be made with a predominantly transverse optical axis, the three regions have different and characteristic motion responses: The OHC/DC region has greater motions than the other two regions at frequencies below the best frequency (sub-BF); the RL region typically has the greatest BF peak and smallest sub-BF motion. The phase of the OHC/DC-region motion increasingly lags BM motion phase as frequency increases; the RL-region motion phase leads BM, but with a relatively small value. All three regions are compressively nonlinear in the BF peak, but only the OHC/DC region shows sub-BF compressive nonlinearity. Here, we describe the strains that arise when the motion transitions between these regions. Large strains (deformations) were observed in the OHC body close to the RL. A region of large strain can be as short as a single 2.7-μm measurement pixel, or it can extend over several pixels, with extensive strains appearing more often at 70 than at 50 dB sound pressure level. Beyond this RL region of large strain, over a distance that can exceed 20 μm, the OHC/DC region displayed nearly spatially unvarying motion; this region vibrated as a relatively rigid body. And beyond this, at sub-BF frequencies, another region of high strain was present, indicating stretching/compressing or bowing/tilting of the DC microtubular stalk.

Scientific Reports · May 2026

Trial-by-trial auditory brainstem response detection (opens in a new tab)

George S. Liu, Noor-E-Seher Ali, Dáibhid Ó Maoiléidigh

Abstract

The neural response of the brainstem to brief sounds, known as the auditory brainstem response (ABR), is widely employed in the laboratory and the clinic to diagnose hearing loss. Current ABR approaches are limited to analyzing the average ABR to hundreds of stimulus trials. Historically, trial-by-trial ABR analysis has not been possible owing to each trial's small signal-to-noise ratio. Here we overcome this limitation and show how to score individual ABR trials. We use the distribution of individual-trial ABR scores to define thresholds, which we call auditory brainstem detection (ABD) thresholds, and to assess suprathreshold hearing. Scores based on individual-trial amplitude and similarity produce lower ABD thresholds than scores based on individual-trial amplitude alone. Our method enables us to rank the suprathreshold hearing of individual subjects. Despite having normal ABR thresholds, some subjects appear to have suprathreshold hearing deficits.