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Electrophysiology publications

Neural recordings made with TDT systems: single units, local field potentials, EEG, ECoG and EMG.

Advanced Healthcare Materials · Apr 2026

Soft Neural Interfaces for Circuit-Level Analysis of Magnetogenetic Deep Brain Stimulation in Parkinson’s Disease Models (opens in a new tab)

Jakyoung Lee, Yeongdo Lee, Enji Kim, … Jang‐Ung Park

Abstract

Magnetogenetic deep brain stimulation (MG‐DBS) represents a wireless neuromodulation that has demonstrated long‐lasting behavioral benefits in Parkinson's disease models. However, the circuit‐level mechanisms underlying these therapeutic effects have remained uncharacterized due to limitations of conventional neural interfaces. We present a bio‐integrable soft neural interface featuring ultrasoft liquid‐metal probes with bioresorbable stiffeners and customizable interconnects directly printed onto cranial surfaces to match individual skull anatomy and nanoparticle injection sites. This platform enables stable multi‐regional recordings from deep brain structures without chronic tissue damage. We systematically investigate MG‐DBS therapeutic mechanisms in a Parkinson's disease mouse model. Circuit‐level analysis reveals that MG‐DBS modulates pathological beta‐band oscillations and inter‐regional synchrony across the cortico‐basal ganglia‐thalamic circuit. Direct comparison with conventional electrical DBS demonstrates that MG‐DBS effects persisted approximately fifteen‐fold longer after stimulation cessation. Our electrophysiological recordings elucidate the mechanistic basis for this sustained therapeutic effect, providing unprecedented insights into magnetogenetic neuromodulation dynamics.

Scientific Reports · Apr 2026

Cortical firing dynamics during micro-arousals vary with sleep/wake history and micro-arousal duration (opens in a new tab)

Natalie L. Hauglund, Lukas B. Krone, Martin Kahn, … Vladyslav V. Vyazovskiy

Abstract

Non-rapid eye movement (NREM) sleep is not uniform but characterized by brief intrusions of wake-like brain activity and increased muscle tonus known as micro-arousals or brief awakenings. Although micro-arousals are an inherent feature of human and animal sleep, knowledge about the neural correlates of micro-arousals is sparse. We here developed an algorithm for automatic detection of micro-arousals based on EMG activity and used it to analyse the associated laminar neural activity in the motor cortex in mice. Our analysis showed that short micro-arousals with a duration below 5 s were associated with decreased cortical firing, while longer micro-arousals with a duration of 5–10 s were associated with increased firing in a similar manner to transitions to wakefulness. Analysis of single-channel firing showed that some channels exhibited increased activity immediately prior to micro-arousals, while others exhibited decreased activity. Slow wave activity (SWA, 1–4 Hz) immediately after micro-arousals was tightly correlated with sleep pressure and even surpassed average SWA levels during NREM sleep in sleep deprived animals. This study provides new insights into the neural mechanisms associated with micro-arousals and identifies a new link between sleep architecture and sleep homeostasis.

bioRxiv · Mar 2026

Paternal behavior is controlled by preoptic Trpc5 neurons (opens in a new tab)

Yongxiang Li, Qingzhuo Liu, Fuhui Wang, … Yong Xu

Abstract

Male parenting behavior is highly conserved and activated only after offspring are born. Here we show that the behavioral switch from infanticide in virgin male mice to caregiving in wild-type sires is associated with enhanced expression and activation of Transient receptor potential channel 5 (Trpc5) in estrogen receptor α (Esr1)-expressing neurons in the hypothalamic medial preoptic area (MPOA). While selective deletion of Trpc5 from Esr1 MPOA neurons diminishes paternal behavior in sires, overexpression of Trpc5 in these neurons converts the otherwise infanticidal virgin males to exhibit care to pups. Mechanistically, Trpc5-dependent changes in neuronal excitability underlie fatherhood-associated Esr1 MPOA neuron plasticity. Notably, Trpc5 overexpression also enhances escape behavior and elicits exploratory diving behavior, suggesting that these neurons control a broader adaptive parenting response in males. These findings establish a Trpc5-dependent MPOA neural signal as a critical regulator of paternal behavior.

Nature Communications · Mar 2026

Dopamine and serotonin inversely modulate D2 medium spiny neurons to regulate cocaine reward (opens in a new tab)

Daniel F. Cardozo Pinto, Michaela Y. Guo, Matthew B. Pomrenze, … Robert C. Malenka

Abstract

Classic theories propose opponent functions for striatal dopamine (DA) and serotonin (5-hydroxytryptamine; 5HT), with DA promoting approach and 5HT promoting patience or avoidance. How these neuromodulators regulate downstream circuits to achieve such antagonistic effects remains mysterious. Here, we mapped striatal 5HT receptor expression in mice to reveal preferential enrichment of putatively excitatory, Gq-coupled 5HT receptors on medium spiny neurons expressing inhibitory D2 DA receptors (D2-MSNs). Acute slice recordings from genetically identified striatal neurons showed that DA and 5HT inversely regulate D2-MSN firing and confirmed that 5HT's excitatory effect on these cells is blocked by 5HT2a and 5HT2c receptor antagonists. Pharmacologically upregulating striatal 5HT release preferentially induced cfos expression in D2-MSNs, validating that 5HT's excitatory effect on these cells also occurs in vivo. Finally, 5HT2c receptor loss-of-function in D2-MSNs, but not D1-MSNs, enhanced animals' sensitivity to the behavioral effects of cocaine - a potent releaser of DA and 5HT - showing that 5HTergic excitation of D2-MSNs counteracts the reinforcing effects of striatal DA release. Altogether these results demonstrate that DA and 5HT inversely modulate D2-MSN activity to regulate cocaine reward, identifying a key circuit mechanism underlying the opponent behavioral effects of these important neuromodulators.

bioRxiv · Feb 2026

Noradrenergic neuromodulation produces a NMDAR-dependent network state of respiratory rhythmogenesis in the preBotzinger Complex (opens in a new tab)

Andrew Kieran Tryba, Jean-Charles Viemari, Yangyang Wang, Alfredo J. Garcia

Abstract

Norepinephrine (NE) is an important mediator of sympathetic activity that influences breathing. At the level of the inspiratory neural network, the preBötzinger complex (preBötC), NE modulation orchestrates changes in neuronal network dynamics that influence the stability of inspiratory rhythmogenesis. While this phenomenon has largely been attributed to NE-modulation of intrinsic excitability of inspiratory preBötC neurons, NE is also capable of modulating synaptic drive. Here, we resolve how NE affects synaptic properties and changes the activity dynamics of interconnected preBötC neurons in rhythmic brainstem slice preparations. Increased network burst amplitude and frequency coincided with enhanced inspiratory drive currents at the single neuron level. This increased drive was blocked by the NMDA receptor (NMDAR) antagonist, APV. Our in silico modeling indicated that synaptic calcium entry via NDMAR is key to maintaining network synchrony during this elevated state of excitability. This was consistent with our multi-electrode array studies revealing that NE-dependent NMDAR activity enhances and preserves synchrony during inspiratory network bursts. This synaptic mechanism may be a critical determinant for shaping inspiratory drive associated with changed neuromodulatory environments. Significance Statement This study demonstrates a previously undescribed synaptic mechanism by which noradrenergic modulation recruits NMDAR activity and shifts inspiratory network dynamics leading to a stable network state where synchronization is preserved among inspiratory neurons. This may be a critical mechanism preventing ventilatory instability when sympathetic activity is enhanced.

Cell Reports · Feb 2026

Fn14 is an activity-dependent, Bmal1-regulated cytokine receptor that induces rod-like microglia and restricts neuronal activity in vivo (opens in a new tab)

Austin Ferro, Dominic J. Vita, Trevor Fallon, … Lucas Cheadle

Abstract

Cytokines and their receptors play important roles in brain development and aging-related disease, but their functions within the healthy adult brain remain poorly understood. Here, we show that pyramidal neurons in hippocampal CA1 induce Fn14 expression in response to activity and environmental enrichment. Once expressed, Fn14 dampens the activity of these neurons most prominently at the daily transition between light and dark. Fn14 expression in CA1 neurons is regulated by the circadian transcription factor Bmal1, and mice lacking Fn14 exhibit disrupted sleep-wake patterns in vivo. At the cellular level, microglia contact fewer excitatory synapses in the absence of Fn14, while neuronal overexpression of Fn14 induces rod-like microglia and recruits them to excitatory synapses. Beyond a homeostatic context, mice lacking Fn14 exhibit heightened susceptibility to chemically induced seizures. These findings reveal that pro-inflammatory cytokine receptors such as Fn14 can play major roles in healthy neurological function in the adult brain.

iScience · Feb 2026

Coordinated infraslow cortical oscillations of neuromodulators during NREM sleep (opens in a new tab)

Celia Kjaerby, Tessa Radovanovic, Eszter Rebeka Kovács, … Maiken Nedergaard

Abstract

Neurotransmitters and neuromodulators regulate brain states through diverse mechanisms, yet how their activities are coordinated during sleep remains unresolved. Using in vivo fiber photometry in adult mice expressing genetically encoded fluorescent biosensors, combined with EEG/EMG recordings, we investigated the temporal organization of multiple neuromodulators during sleep in barrel cortex, with norepinephrine (NE) as a reference signal. All five neuromodulators examined, acetylcholine, serotonin, dopamine, histamine, and NE, exhibited synchronized infraslow cortical oscillations during NREM sleep. Optogenetic suppression of locus coeruleus (LC) neurons abolished NE oscillations and selectively reduced acetylcholine fluctuations in barrel cortex, whereas targeted inhibition of basal forebrain cholinergic neurons attenuated REM-associated acetylcholine elevations without disrupting NREM-related oscillations or NE dynamics. The synchronized infraslow cortical oscillations spanning multiple neuromodulators reveal a previously unrecognized mechanism for organizing sleep architecture.

Science Advances · Jan 2026

The gut-brain vagal axis governs mesolimbic dopamine dynamics and reward events (opens in a new tab)

Oriane Onimus, Faustine Arrivet, Tinaïg Le Borgne, … Giuseppe Gangarossa

Abstract

Reward processes have traditionally been ascribed to dopamine (DA)–associated circuits. While external stimuli, such as food and drugs of abuse, are activators of DA-neuron activity, growing evidence indicates that interoceptive signals also play a critical role. Among these, the gut-brain vagal axis has emerged as a key regulator, although its precise contribution to mesolimbic DA signaling and behavior remains unclear. Here, we combine complementary ex vivo and in vivo approaches across multiple scales to show that gut-brain vagal tone is essential for gating mesolimbic DA system activity and functions, modulating DA-dependent molecular and cellular processes, and scaling both food- and drug-induced reinforcement. These findings challenge the traditional brain-centric view of reward processing, supporting a more integrated model in which vagus-mediated interoceptive signals intrinsically shape motivation and reinforcement. By uncovering the influence of gut-brain vagal communication on DA functions, this work provides insights into the neurobiology of adaptive and maladaptive reward, with broad relevance for eating disorders and addiction.

npj Parkinson's Disease · Jan 2026

Sleep firing rate homeostasis is disrupted in mild parkinsonism (opens in a new tab)

Bharadwaj Nandakumar, Ajay K. Verma, Ying Yu, … Luke A. Johnson

Abstract

Reduction in neuronal firing from wake to sleep, i.e., sleep firing rate homeostasis (sFRH), is essential for restorative sleep. Sleep dysfunction is common in Parkinson's disease (PD), but sFRH has not been investigated. Here, using a within-subject design in the nonhuman primate model of PD, we report that thalamocortical sFRH is disrupted in parkinsonism. These findings can inform therapeutic approaches tailored to normalize sFRH and reestablish restorative sleep in PD.

Proceedings of the National Academy of Sciences · Jan 2026

A neural circuit basis for reward-induced suppression of fear generalization and enhancement of fear extinction (opens in a new tab)

Yong Sang Jo, Mi-Seon Kong, Ekayana Sethi, … Larry S. Zweifel

Abstract

How positive and negative affective stimuli interact in the brain to influence behavioral outcomes remains poorly understood. Here, we show that recall of a positively valenced reward-associated cue (reward-conditioned stimulus, CS Rew +) can prevent or reverse fear generalization in mice. Modification of generalized fear by recall of a CS Rew + is dependent on the midbrain dopamine system and the regulation of discriminatory fear encoding by the central amygdala (CeA). Precisely timed, transient elevations in dopamine are necessary to reverse fear generalization and nondiscriminatory fear encoding in the CeA. Recall of a positive association is also effective at enhancing the extinction of a conditioned fear response in a dopamine-dependent manner. These data demonstrate that recall of a positive experience can be an effective means to suppress generalized fear and show that dopamine projections to the CeA are an important neural substrate for this phenomenon.

bioRxiv · Jan 2026

Neural representation of action grammar structure in primate frontal cortex (opens in a new tab)

Lucas Y. Tian, Daniel J. Hanuska, Kedar Garzón Gupta, … Winrich A. Freiwald

Abstract

Humans and other animals can solve new problems, even on the first attempt. This capacity to generate novel problem-solving behavior has been hypothesized to depend on brain mechanisms for recombining units of knowledge using systems of procedural rules, or grammars . Yet, whether and how the brain represents and implements grammars remains unclear, in large part due to the lack of neural recordings (typically performed in animal models) during grammar-based problem solving (typically studied in humans). Here, we address that gap, and in turn identify an underlying neural basis of grammatical behavior. We designed a visual–motor construction task in which macaque monkeys trace complex, often novel, geometric figures by generating a sequence of strokes, each a distinct shape, like a circle, dash, or chevron (action symbols 1 ). Critically, sequencing was guided by a learned hierarchical action grammar A n B m C k , meaning “repeat shape A, then repeat shape B, then repeat shape C”, where the number of repetitions (n, m, and k) varied across problems. Behavior was internally generated (no cues guiding stroke order), problem-directed (to construct a specific image), and exhibited zero-shot generalization (successful on the first trial for novel problems, including harder ones)--key hallmarks of grammar use. To identify underlying neural substrates, we recorded from multiple frontal cortical areas previously implicated in rule use or action sequencing. Activity during drawing encoded key structural properties of the action grammar: (i) shape index (A, B, C), (ii) abstract role (e.g., the role A independent of the specific shape), and (iii) ordinal position within a shape repeat. Moreover, all three properties were strongest in a single region, the pre-supplementary motor area (preSMA). We suggest the possibility that this conjunction of representations is a signature of an implementation of an iterative algorithm resembling a “for-loop” program: internally tracking how many repetitions remain for each shape index and switching to the next when complete. Our study establishes a paradigm for studying the neural basis of grammar-guided novel behavior and identifies in preSMA a dynamic representation of grammatical structure supporting such behavior.

The Journal of Neuroscience · Jan 2026

Neuronal Features of Visual Attention in the Mouse Superior Colliculus Depend on Learned Behavioral Relevance (opens in a new tab)

Lupeng Wang, Christian Quaia, Kerry Elliott, … Richard J. Krauzlis

Abstract

Visual selective attention is not wired into the brain fully formed and immutable but is acquired and refined as animals learn by interacting with their environment. Here we investigated this process by studying neuronal activity in the superior colliculus (SC) of male and female mice that learned different meanings of the same visual stimuli. We recorded spiking activity of neurons across the superficial and deep SC layers in three cohorts of mice, each trained using a tailored set of task rules that attributed different levels of behavioral relevance to the visual stimuli. Experimental conditions across the three tasks were carefully matched for visual stimulation and task engagement. We found that several markers of attention-related activity depended on the level of learned behavioral relevance, with the strongest effects in deep SC. First, for activity evoked by cue onset, visual responses in superficial SC were larger in animals that exhibited higher learned relevance. In deep SC, the presence of visual onset responses depended entirely on the learned behavioral relevance. Second, traditional attention-related modulation, defined as enhanced steady-state activity for the visual stimulus at the cued location, was also stronger with higher learned relevance, and this effect was limited to deep SC. Finally, the response to the visual change at the cued location was virtually absent when learned behavioral relevance was low but was prominent after visual training. Together, these results reveal that several fundamental features of attention-related modulation depend on the behavioral relevance learned through task-specific training, including aspects of stimulus-driven attention.

Communications Biology · Jan 2026

Vigilance state dissociation induced by 5-MeO-DMT in mice (opens in a new tab)

Benjamin J. B. Bréant, José Prius Mengual, Alexander Andrews, … Vladyslav V. Vyazovskiy

Abstract

Psychedelics lead to profound changes in subjective experience and behaviour, which are typically conceptualised in psychological terms rather than corresponding to an altered brain state or a distinct state of vigilance. Here, we performed chronic electrophysiological recordings from the neocortex concomitant with pupillometry in freely moving adult male mice following an injection of a short-acting psychedelic 5-methoxy-N,N-dimethyltryptamine (5-MeO-DMT). We report an acute induction of a dissociated state, characterised by prominent slow oscillations in the cortex and marked pupil dilation in behaviourally awake, moving animals. REM sleep was initially markedly suppressed, but was overcompensated in the subsequent 48 hours, while administration of 5-MeO-DMT immediately after sleep deprivation attenuated the subsequent rebound of sleep slow-wave activity. We argue that the occurrence of a dissociated state combining features of waking and sleep may fundamentally underpin the known and hypothesised effects of psychedelics — from dream-like hallucinations to reopening of the critical period for plasticity.

IEEE Transactions on Neural Systems and Rehabilitation Engineering · 2026

Pilot Chronic Evaluation of a Slanted Electrode Array as an Auditory Nerve Implant (opens in a new tab)

W. Mitchel Thomas, Richard K. Gurgel, Loren Rieth, … David J. Warren

Abstract

Objective: The purpose of this paper is to present a chronic, preclinical, pilot study of a multi-electrode auditory nerve implant. To date, the most successful auditory neuroprosthesis is the cochlear implant, but these devices have known limitations. Intraneural stimulation of the auditory nerve is a promising alternative, but preclinical investigations of multi-electrode devices have been limited to acute or semi-chronic studies. Methods: Six cats were chronically implanted in the right auditory nerve with a 15-channel Utah Slant ArrayTM. The array's position in the internal auditory canal was confirmed using computed tomography. Electrode impedance and evoked responses were recorded regularly during the indwelling period to evaluate performance. Results: Two of the six implants met endpoint criteria at 6 months, with stable electrode impedances and robust evoked responses on at least 50% of their channels. Another two implants exhibited stable electrode impedances, but activation thresholds increased over three months. Two implants failed within the first two weeks due to device migration caused by connector-related issues. Conclusion: This study reports the first successful chronic deployment of an multi-electrode auditory nerve implant in a preclinical model. Two implanted cats exhibited stable chronic performance, marked by a consistent set of electrodes capable of eliciting evoked responses. The failure modes of the remaining four cats are discussed and recommendations are made to stabilize implant placement. The study lays a solid foundation for future chronic safety and efficacy investigations as part of an effort to translate this new neuroprosthetic technology into the clinic.

Research · 2026

Two Molecularly Defined Neuronal Types in the Mammillary Body Govern Different Temporal Periods during Working Memory Maintenance (opens in a new tab)

Yiqing Guo, Lanfang Li, Zhenye Hou, … Xinyan Li

Abstract

The mammillary body (MB) has traditionally been regarded as a relay station for the hippocampus and plays a pivotal role in the Papez circuit. However, its molecular and cellular organization remains inadequately characterized. This study focuses on the horizontally symmetrically distributed neurotensin (Nts)-expressing and nitric oxide synthase 1 (Nos1)-expressing neurons in the MB, demonstrating that Grik4 (encoding a high-affinity kainate receptor subunit) underlies their distinct electrophysiological properties. Within neural circuits, Nts and Nos1 neurons receive excitatory inputs from the ventral subiculum and send parallel excitatory projections to the dorsomedial and ventrolateral subdivisions of the anteroventral thalamus (AV). These 2 cell type-specific circuits are essential for working memory and exhibit selective activation during the maintenance phase with a marked temporal difference. Together, our findings establish a direct link from molecular identity to circuit architecture and cognitive processing by demonstrating that molecularly distinct Nts and Nos1 neurons constitute differential circuits with convergent inputs, divergent outputs, and dissociable roles in working memory maintenance. This work thus reveals a fundamental cross-scale organizational principle—molecule, cell, circuit, function—within the MB.

Brain Stimulation · 2026

Effects of low-frequency burst stimulation of the motor thalamus on cortical neural co-firing (opens in a new tab)

Kyungsoo Kim, Giri P. Krishnan, JaeYeon Kim, … Karunesh Ganguly

Abstract

Background: Electrical stimulation targeting the motor thalamus (Mthal) represents an emerging strategy for regulating motor cortical activity patterns, however the fundamental mechanisms and optimal stimulation configurations are not well established. Objective: To characterize how burst Mthal stimulation modulates cortical activity and to identify stimulation parameters that maximize cortical co-firing via thalamocortical rebound mechanisms. Methods: We conducted acute electrophysiological experiments in anesthetized rats using Mthal stimulation with systematically manipulated burst stimulation parameters (i.e., number of pulses and pulse width) in the low-frequency band (1-8 Hz) modulation cycle. Cortical responses across large areas covering primary and secondary motor cortex were recorded. Additionally, intracortical recordings were performed for detailed spike activity monitoring during stimulation. Cortical activity patterns in local field potentials and spike activity were analyzed to quantify the effects of Mthal stimulation on motor cortex. Computational thalamocortical circuit models were employed to explore the mechanistic basis of frequency-selective modulation effects. Results: Burst Mthal stimulation elicited tunable cortical excitation, with optimal modulation achieved at 3-4 Hz. This preferred frequency corresponded to the natural rebound timing of thalamocortical (TC) cells and generated maximal cortical co-firing and synchronization. Higher stimulation frequencies (e.g., 8 Hz) resulted in suppressed and diminished responses. Computational modeling further validated that the cellular mechanism of the TC cell rebound excitation leads to frequency-dependent cortical modulation. Conclusion: Burst Mthal stimulation demonstrates frequency-selective modulation of cortical network excitability, with 3-4 Hz protocols providing optimal enhancement of synchronized activity through exploitation of thalamocortical rebound dynamics. These results establish motor thalamic stimulation as a promising and efficient methodology for precise cortical network control and offer mechanistic foundations for developing therapeutic neuromodulation interventions aimed at motor system rehabilitation.

Nature Communications · Dec 2025

Application of kilohertz-frequency block to mitigate off-target motor effects of vagus nerve stimulation in swine (opens in a new tab)

Kevin P. Cheng, Ashlesha Deshmukh, Aaron K. Gholston, … Kip A. Ludwig

Abstract

Selective activation of small versus large diameter nerve fibers represents a broad challenge in the electrical modulation of neural activity for clinical applications. For example, off-target activation of motor nerve fibers was implicated in several failed vagus nerve stimulation (VNS) clinical trials by effectively limiting maximum applicable current amplitudes, thereby preventing robust activation of smaller diameter fibers responsible for therapeutic effects. Kilohertz high-frequency (HF) block is one of several strategies proposed to overcome this gap, but has yet to be thoroughly investigated in large, multifascicular, mixed nerves comparable in scale to humans. Here, we evaluated effects of HF block on the neural, muscular, and cardiac responses evoked by traditional low-frequency (LF) VNS in a large animal (swine) model. We found that HF selectively blocks neural fibers, and their associated physiological responses, in a size dependent manner with a high degree of specificity and establish initial thresholds for achieving block in large multifascicular nerves. Critically, we demonstrate that appropriately titrating HF amplitude can eliminate off-target LF-evoked motor responses while preserving activation of smaller diameter fibers targeted by clinical VNS. Beyond VNS, these data establish HF as a potentially viable strategy in any neuromodulation therapies where off-target activation of large diameter fibers limits therapeutic efficacy.

Communications Biology · Dec 2025

Neuronal mismatch responses to auditory stimuli in the dorsal hippocampus of anesthetized rats (opens in a new tab)

Jazmín S. Sánchez, David Pérez-González, Manuel S. Malmierca

Abstract

The hippocampus is classically linked to memory, yet increasing evidence points to a broader role in perceptual inference and deviance detection. Predictive coding theories propose that perception minimizes mismatches between expected and actual sensory input, expressed in neural signatures such as mismatch negativity (MMN) and P300. Although MMN arises mainly from sensory and prefrontal cortices, the hippocampus is anatomically interconnected with both and may also contribute to prediction error processing. We recorded single- and multi-unit activity and local field potentials (LFPs) from DG and CA1 in urethane-anesthetized rats during an auditory oddball paradigm and a no-repetition control sequence to dissociate prediction error from repetition suppression. Approximately 20% of hippocampal neurons were sound responsive, and a subset showed deviant selectivity. Spiking activity predominantly reflected prediction errors, while LFPs revealed complementary contributions from repetition suppression and prediction error. Early LFP components were enhanced for randomly presented deviants, whereas later components within the P300 latency range were stronger for predictable deviants, indicating temporally distinct phases of error signaling and top-down modulation. These findings identify the hippocampus as an active contributor to auditory deviance detection and support a hierarchical model in which hippocampal circuits participate in predictive sensory processing beyond memory.

Nature Communications · Dec 2025

Brain-wide resting-state fMRI network dynamics elicited by activation of single thalamic input (opens in a new tab)

Linshan Xie, Xunda Wang, Xuehong Lin, … Ed X. Wu

Abstract

Understanding how the brain rapidly processes neural information through large-scale network dynamics is fundamental to neuroscience. Resting-state fMRI (rsfMRI) captures networks by probing spontaneous neural activity fluctuations, yet whether these networks can accommodate fast, sensitive information processing remains unknown. Here, we reveal brain-wide rsfMRI network dynamics (i.e., states and their transitions) that enable fast information processing through rapid activity-triggered network reconfiguration in male rats. Following activation of a single optogenetically evoked somatosensory thalamic input, states and transitions associated with internally-oriented information processing are quickly suppressed and diverted through basal forebrain and hypothalamus to strengthen externally-oriented (i.e., sensory) processes. Simultaneous rsfMRI and electrophysiology measurements in somatosensory and cingulate cortices demonstrate that intra-regional wide-band and inter-regional narrow-band (i.e., slow-oscillations) neural activity synchronizations directly drive rsfMRI network dynamics and reconfiguration to support fast processing of single thalamic input. Our study uncovers fast interactions between neural activity and rsfMRI networks in processing single neural input.