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Publications using TDT

More than 6,000 published studies have used TDT systems. Find papers by research area, TDT product, species or year.

6,523 papers

Proceedings of the National Academy of Sciences · Aug 2026

Ca2+ regulation of PMCA2 calcium pump expression in hair cells of Tmc1 deafness mutants (opens in a new tab)

Amanda Bryn Rolseth, Maryline Beurg, Dakota Elle Konrad, … Robert Fettiplace

Abstract

Mutations in transmembrane channel-like protein 1 (TMC1), the pore-forming component of the mechano-electrical transducer (MET) channel in auditory hair cells, cause cell death and deafness in 3-wk old mice. We studied mice with mutations Tmc1 p.T416K, p.M412K, p.D528N, and p.D569N, which possessed functional MET channels at postnatal day (P)6 but became deaf before P21. These Tmc1 mutants had channels with reduced Ca 2+ permeability and lower expression of the PMCA2 calcium pump in outer hair cell (OHC) stereocilia. The reduction in PMCA2 density was directly correlated with reduced Ca 2+ entry via the MET channel. Over the first postnatal week, PMCA2 expression decreased in cochlear cultures containing lowered extracellular Ca 2+ , but after P11, PMCA2 density was insensitive to Ca 2+ changes. The lower PMCA2 density in mutants was maintained into adulthood and may contribute to hair cell death. Before the onset of hearing, PMCA2 continuously turns over, and its insertion into stereocilia from an identified vesicular compartment is regulated by cytoplasmic [Ca 2+ ]. PMCA2 turnover was strongly inhibited by the endocytosis blocker, Pitstop2, and by PtdIns(4,5)P 2 blockers like phenylarsine oxide (PAO), which was shown to elevate stereociliary [Ca 2+ ]. We argue the effects of PAO on mechanotransduction may be partly due to this Ca 2+ increase. OHC bundles also expressed Neuroplastin (NPTN), a PMCA2 accessory protein, whose development paralleled PMCA2, and we propose it stabilizes the pump complex in stereocilia. NPTN expression was delayed about 2 d relative to PMCA2 and was less Ca 2+ sensitive, implying it originates from a different internal pool of vesicles.

bioRxiv · Aug 2026

Rescue schizophrenia-related phenotypes caused by Setd1a deficiency by histone demethylase inhibitors (opens in a new tab)

Yiqiong Liu, Guoguang Xie, Shan Jiang, … Yi Zhang

Abstract

Schizophrenia (SCZ) is a genetically complex neuropsychiatric disorder in which rare loss-of-function mutations in the histone methyltransferase SETD1A confer substantial risk. Although SETD1A haploinsufficiency had been linked to morphological, synaptic and behavioral abnormalities in the prefrontal cortex, whether and how SETD1A coordinates transcriptional and functional programs across different brain regions remains unknown. Here, we delineate the brain region-specific effects of SETD1A-associated dysfunction using conditional Setd1a knockout mice. We find that the dorsal striatum (dStr) and mediodorsal thalamus (MD) exhibit distinct transcriptomic and neuronal alterations to those in the PFC, and show transcriptomic enrichment for other SCZ risk genes. Loss of Setd1a in the dStr or MD drives selective vulnerability in key behavioral assays, suggesting important roles for these brain regions in the etiology of SCZ. By screening 6 existing H3K4 demethylase inhibitors, we identify the LSD1 (KDM1A) inhibitor TAK-418 as a potent modulator capable of restoring H3K4me3 levels and gene expression, as well as rescuing synaptic and SCZ-like behavioral phenotypes in the Setd1a +/− mice. Thus, our work provides a mechanistic link between high-penetrance SETD1A variants and region-specific brain dysfunction, establishing a framework for connecting rare loss-of-function variation in chromatin regulators to multidimensional neuropsychiatric phenotypes.

Biophysical Journal · Aug 2026

Displacement gradients in the lateral region of the organ of Corti dissipate power in the cochlea (opens in a new tab)

Lauren A. Chiriboga, C. Elliott Strimbu, Elizabeth S. Olson

Abstract

Measurements and models of cochlear mechanics are built upon understanding the fluid mechanics within the cochlear scalae and the fluid interactions within the organ of Corti, basilar membrane (BM), and tectorial membrane, which together make up the organ of Corti complex (OCC). Even in the absence of an active mechanism, the passive cochlea exhibits a traveling wave, which peaks at a location slightly basal of the active peak for a given stimulus frequency, and terminates at a location similar to that of the active traveling wave. The mechanics that result in the termination of the traveling wave are not fully understood. Here, we examine motion in the lateral region of the guinea pig OCC, including the BM, Boettcher's cells (BCs), and Hensen's cells, using optical coherence tomography. We explore this motion as a potential source of viscous forces due to motion gradients. The BCs lie on the BM and were found to move at the same amplitude as the BM. Beyond the BCs, displacement amplitudes exponentially decreased, suggesting that the lateral region motion is "fluid-like." The displacement amplitude decay rates in the lateral region were similar to motion decay rates previously observed in the scala tympani fluid. We compare our results to predictions from a 3D cochlear model and estimate power dissipation as a result of the viscous forces associated with the displacement gradients in the lateral region. The fluid-like motion and viscous forces in the lateral region may serve as a source of power dissipation and thus traveling wave damping.

iScience · Aug 2026

Targeted inhibition of the BDNF/AKT/mTOR pathway in the inferior colliculus ameliorates salicylate-induced tinnitus in rats (opens in a new tab)

Jiachuan Lin, Jiaqian Wu, Yingxin Wang, … Jianning Zhang

Abstract

Tinnitus involves peripheral auditory damage and aberrant central plasticity, with dysregulated BDNF signaling linking injury to compensation. Yet, direct evidence connecting BDNF/AKT/mTOR pathway activation to behavioral phenotypes is limited. This study examined BDNF/AKT/mTOR expression in the inferior colliculus (IC) of sodium salicylate (SS)-induced tinnitus rats and assessed therapeutic inhibition. Rats received intraperitoneal SS, showing decreased GPIAS ratios, elevated ABR thresholds, and upregulated BDNF/TrkB/AKT/mTOR phosphorylation in the IC-changes associated with tinnitus-like behavior. Bilateral IC microinjection of BDNF siRNA or systemic rapamycin revealed that siRNA suppressed BDNF/TrkB and ameliorated tinnitus without improving hearing, while rapamycin reduced mTOR phosphorylation and partially alleviated behavior. These results first demonstrate that BDNF/AKT/mTOR upregulation in the IC contributes to tinnitus in SS rats, and its inhibition improves behavioral manifestations without reversing peripheral hearing loss.

iScience · Aug 2026

Distinctly structured social behavior across three rodent strains is associated with different neural activity patterns (opens in a new tab)

Rishika Tiwari, Alok Nath Mohapatra, Claudio J. Mendes, … Shlomo Wagner

Abstract

Social behavior varies considerably across mammalian species, yet the neural basis for these variations remains unclear. We compared the behavior of three commonly used laboratory rodent strains (C57BL/6J and CD1 mice and SD rats) in social preference and free interaction tasks. Animals carried chronically implanted electrodes in brain regions associated with social motivation. The three strains exhibited distinctly structured social behavior: SD rats showed the strongest social motivation, CD1 mice were most active, and C57BL/6J mice displayed the most restrained behavior. Electrophysiology revealed strain- and task-specific theta and gamma power and coherence. Strikingly, SD rats displayed low baseline coherence followed by robust induction during interactions, while C57BL/6J mice exhibited opposite tendencies. Machine learning models allowed accurate strain separation based solely on brain electrophysiology, with theta and gamma coherence between the prelimbic cortex and nucleus accumbens shell playing a key role in defining distinct neuronal signatures of strain-specific social strategies.

Current Biology · Aug 2026

Exposure to broadband noise during non-REM sleep impairs hippocampal sharp-wave ripples and memory consolidation (opens in a new tab)

Karla Salgado-Puga, Utku Kaya, Gideon Rothschild

Abstract

Sleep is critical for consolidating recent experiences into memories. A key mechanism underlying this process is hippocampal sharp-wave ripples (SWRs). Although SWR-dependent memory consolidation is often viewed as an "offline" process, sounds heard during sleep are processed by a highly active auditory system that projects to medial temporal lobe structures, providing a pathway by which sounds may modulate hippocampal activity. While processing salient sounds during sleep can be adaptive, whether ongoing processing of environmental sounds interferes with SWR-dependent memory consolidation remains unknown. To address this question, we recorded neural activity in the CA1 region of the hippocampus in sleeping rats and used a closed-loop system to deliver non-waking broadband noise (BBN) stimuli during or outside of SWRs. We found that BBN suppressed ripple power and reduced SWR rates. BBN delivered during SWRs (On-SWR) produced a greater reduction in ripple power than BBN delivered outside SWRs (Off-SWR). This suppression was accompanied by substantial changes in SWR-associated spiking. We next tested the influence of BBN on memory consolidation using a conditioned place preference paradigm. On-SWR BBN presentation during post-learning sleep abolished memory retention 24 h after learning while sparing memory immediately after sleep. By contrast, Off-SWR BBN weakened memory at both time points. Notably, On-SWR BBN induced a significantly larger impairment in memory 24 h after learning as compared with Off-SWR BBN. These findings suggest that exposure to noise during sleep disrupts hippocampal activity and impairs memory consolidation in a manner that depends on the timing of sounds relative to SWRs.

Cell Reports Methods · Aug 2026

A hybrid micro-ECoG for functionally targeted multi-site and multi-scale investigation (opens in a new tab)

Patrick Jendritza, Rickard Liljemalm, Thomas Stieglitz, … Christopher Murphy Lewis

Abstract

Brain function relies on coordinated activity across spatial and temporal scales. Single neurons integrate local and long-range connectivity and reflect activity across brain-wide networks. Understanding integrated brain function requires tools capable of recording from anatomically connected populations in distributed brain areas to bridge local and global dynamics. Here, we present high-density, micro-electrocorticography arrays that facilitate multi-scale studies of brain activity. The hybrid arrays integrate the desirable features of silicone elastomers and polyimide films: silicone provides optical transparency and permits repeated penetration with intracortical arrays, while polyimide enables fine photolithographic feature definition. This combination facilitates high-throughput functional mapping to identify targets and insertion of intracortical arrays for dense local sampling. We demonstrate functional mapping in rats, cats, and marmosets, showing how functional maps guide multi-area laminar recordings. Finally, we demonstrate local and feedforward optogenetic stimulation to investigate cortico-cortical interactions. These capabilities establish the hybrid μECoG as a compelling tool for systems neuroscience.

Journal of Neuroinflammation · Aug 2026

OMVs of Pseudomonas aeruginosa extracted from chronic suppurative otitis media trigger ototoxicity: possible relation to activation of NLRP3 inflammasome (opens in a new tab)

Junhong Zhang, Rongjun Man, Jingyi Zhao, … Zhixin Cao

Abstract

Background Chronic suppurative otitis media (CSOM) can lead to sensorineural hearing loss (SNHL), but the underlying mechanisms remain incompletely understood. This study aimed to investigate whether the outer membrane vesicles (OMVs) from Pseudomonas aeruginosa ( P.aeruginosa ), a common CSOM pathogen, can induce ototoxicity via activation of NLRP3 inflammasome. Methods A CSOM model was established in C57BL/6 mice by intratympanic injection of P.aeruginosa -derived OMVs. The pathological changes in the middle and inner ear and the activation of the NLRP3 inflammasome pathway were evaluated using cochlear tissues from model mice, together with in vitro models employing organ of Corti-derived (HEI-OC1) cells and postnatal day 4 (P4) mouse cochlear explants, through histopathological staining, immunoassays, and RNA sequencing. The protective role of the NLRP3 inhibitor MCC950 was additionally investigated. Results P. aeruginosa OMVs induced dose- and time-dependent reductions in cellular metabolic activity in the HEI-OC1 organ of Corti cell line, as well as cochlear hair cell damage and NLRP3 inflammasome activation in postnatal P4 cochlear explants. In vivo, OMV inoculation provoked CSOM and inner ear injury within 14 days, accompanied by significant hair cell loss. RNA-sequencing analysis of CSOM mouse cochleae identified 2583 differentially expressed genes, predominantly enriched in inflammatory pathways, with marked upregulation of NLRP3, Pycard, Casp1, GSDMD, and IL-1β. Treatment with MCC950 significantly alleviated inner ear inflammation, preserved cochlear morphology, reduced hair cell damage, and suppressed the expression of NLRP3, ASC, caspase-1, and GSDMD. Conclusion These findings provide evidence supporting the hypothesis that P. aeruginosa OMVs contribute to CSOM-associated cochlear damage both in vivo and in vitro, a process associated with NLRP3 inflammasome activation within the inner ear. While causality cannot be fully established, inhibition of NLRP3 signaling with MCC950 mitigated inner ear injury and suppressed pyroptosis-related effectors, implying its potential as a novel therapeutic strategy for CSOM-related SNHL.

Science Advances · Jul 2026

Insular routing to orbitofrontal cortex enables breathing awareness (opens in a new tab)

Joshua Y. Assi, Stephan Bickel, Harly E. Greenberg, … José L. Herrero

Abstract

How does the human brain detect and respond to disruptions in breathing? While animal studies have advanced our understanding of respiratory control, breathing distress in humans remains difficult to treat. It often arises not only from pulmonary lesions or brainstem dysfunction but also from how higher brain regions interpret breathing signals shaped by emotion and experience. We recorded intracranial cortical activity in neurosurgical patients during an interoceptive task involving transient breathing challenges. Conscious detection of these disruptions was predicted by early responses in the anterior insula, which routed signals to orbitofrontal and premotor cortices for appraisal and compensation. These cortical regions preferentially encoded inspiratory effort or airflow, revealing signal-specific processing that echoes functional segregation in brainstem centers. The present findings identify a dynamic insular-frontal circuit for sensing and adapting to respiratory challenges, offering insight into the neural basis of breathing awareness and its disruption in disease.

bioRxiv · Jul 2026

Closed-loop sensory feedback enables fast and reliable instrumental acquisition in head-fixed mice (opens in a new tab)

Ajit Ranganath, Daniel Hähnke, Simon N. Jacob

Abstract

Instrumental learning typically requires hundreds to thousands of trials in which subjects learn to link motor responses to sensory cues. In standard rodent protocols, response accuracy is reported only at trial end, preventing subjects from correcting erroneously initiated responses. We hypothesized that within-trial, closed-loop sensory feedback would accelerate instrumental learning by providing real-time information about response correctness. Head-fixed mice performed a two-alternative forced-choice task by rotating a choice wheel in response to sensory cues. Mice received either no feedback (n = 18), auditory feedback (n = 16), or audiovisual feedback (n = 4) coupled to wheel movements. Feedback-receiving mice required significantly fewer trials to reach 70 % accuracy criterion (median: 3186, 4918 and 7329 trials for multimodal, unimodal and no feedback, respectively; p = 0.0245) and showed higher accuracy when modifying choices (expert stage: 17 %, 11 % and 9 % accuracy in trials with modified choices for multimodal, unimodal and no feedback, respectively; p=1.04×10⁻⁶). Only feedback mice displayed movement refinements across training (p = 8.02×10⁻⁶, p = 4.07×10⁻¹⁸ and p = 0.2602 for multimodal, unimodal and no feedback, respectively). In summary, closed-loop sensory feedback accelerated instrumental acquisition, demonstrating its value as routine training protocol. HIGHLIGHTS Mice provided with feedback require fewer trials to reach expert stage in an instrumental learning task Mice provided with feedback perform with higher accuracy in trials involving ‘changes of mind’ Movement trajectories of mice provided with feedback undergo refinement as training advances Sensory feedback can be used as a training aid to accelerate instrumental learning

eLife · Jul 2026

Excitatory cholecystokinin neurons in the CA3 area regulate the navigation learning and neuroplasticity (opens in a new tab)

Fengwen Huang, Abdul Baset, Stephen Temitayo Bello

Abstract

Hippocampus, a key hub of neural circuits for spatial learning and memory, has attracted tremendous studies. Neuronal information processing in the hippocampus can be regulated by many types of neuropeptides. Cholecystokinin ( Cck ), the most abundant neuropeptide in the central nervous system that is involved in modulating neuronal functions, such as cognition, memory, and neuroplasticity, is widely expressed in the hippocampus. However, whether local excitatory Cck neurons modulate hippocampal function is still unclear. In this study, we showed that CA1 pyramidal neurons receive projections from excitatory Cck neurons in area CA3 (CA3 Cck neurons) in adult mice. Subsequently, activation of the CA1-projecting CA3 Cck neurons triggers the release of Cck . Then, we found that the activity of CA3 Cck -CA1 neurons supports the hippocampal-dependent tasks. Furthermore, inhibition of CA3 Cck -CA1 projections or knockdown of CA3 Cck gene expression markedly impaired the behavioral tasks and neuroplasticity. Taken together, these results may add to a better understanding of how neuromodulators regulate the neural functions in the central nervous system.

bioRxiv · Jul 2026

Adaptive immune responses are not causal to SGN death after kanamycin-induced hair cell loss (opens in a new tab)

Adrianna M. Caro, Steven H. Green

Abstract

Aminoglycoside antibiotics such as kanamycin induce sensorineural hearing loss by killing hair cells, resulting in secondary degeneration of spiral ganglion neurons (SGNs). Previous studies show that anti-inflammatory agents reduce SGN death, implicating a causal role of the immune response. This is consistent with observations of increased numbers of macrophages and lymphocytes, including T and NK cells, in the spiral ganglion after exposure to aminoglycosides. Here, we directly test the role of T cells and other lymphocytes in SGN degeneration in kanamycin-deafened rats. Homozygous RNU nude rats that lack T cells – but retain NK and B cells– show neurodegeneration similar to rats with a normal T cell complement, indicating that T cells are not necessary for neurodegeneration. Homozygous SRG rats lacking all lymphocytes (i.e., T, B, and NK cell-deficient), exhibit remarkable regional variation in the pattern of spiral ganglion degeneration post-deafening. In the basal half of the ganglion, SGN degeneration is significantly reduced in deafened SRG rats, implying a role for lymphocytes, presumably NK cells of the innate immune system, in SGN death. In the apical half of the deafened ganglion, SGN degeneration is not significantly affected by the lack of all lymphocytes, implying a role for other cellular mechanisms.

Exploration · Jul 2026

Triggered Calcium Lightning Programs Cochlear Development (opens in a new tab)

Qiang Ma, Hai‐Peng Wang, Yu‐Meng Jiang, … Hai‐Bo Shi

Abstract

Spontaneous calcium (Ca 2+ ) waves play a critical role as internal stimuli in the early developing auditory system before the onset of sensory experiences. However, neither the spatiotemporal control of spontaneous Ca 2+ waves nor their impacts on auditory development are well understood. Here we report that a lateral array of inner supporting cells (ISCs) beneath the inner hair cells displays a spontaneous ultra‐long, ultra‐fast, transient Ca 2+ flash, termed “Ca 2+ lightning”, which triggers a series of simultaneous bursts of Ca 2+ waves in the whole cochlea, before the ear canal opening. The Ca 2+ lightning margins the cochlear ISCs at different developmental stages that correspondingly exhibit different Ca 2+ activities. Triggered by an ATP‐induced high‐level Ca 2+ wave, the Ca 2+ lightning rapidly propagates laterally into neighboring ISCs through the intricate interplay of the T‐type Ca 2+ channel, Anoctamin 1 (Ano1) Ca 2+ ‐activated Cl − channel and Connexin 26 (Cx26). The genetic deletion of Cav3.2, Ano1, or Cx26 abrogates Ca 2+ lightning flashes and dysregulates cell development and functions in peripheral cochleae. We propose that cochlear Ca 2+ lightning flashes orderly with Ca 2+ waves together orchestrate the spatiotemporal maturation processes of the peripheral auditory system before the onset of hearing.

bioRxiv · Jul 2026

Mesohabenular glutamatergic regulation of the consequences of uncontrollable stress (opens in a new tab)

Dillon J. McGovern, Melissa Deming, Hadley Mills, … David H. Root

Abstract

Perceived or volitional control over a stressor is a critical determinant of resilient versus susceptible behavioral phenotypes. Activation of the lateral habenula (LHb) is required for the behavioral changes or “learned helplessness” effects that follow inescapable, but not escapable, stress. However, the relevant LHb inputs that regulate its mediation of inescapable stress outcomes are not fully elucidated. We find that ventral tegmental area (VTA) glutamatergic axons in LHb are activated by aversive stimuli, and this activation was not altered by prior inescapable stress experience. Similarly, optogenetic activation of VTA glutamatergic axons in LHb resulted in c-Fos expression in LHb neurons that did not depend on a prior inescapable stress experience. Photoinhibition of VTA glutamatergic axons in LHb during each inescapable stress trial prevented social and nonsocial consequences of inescapable stress. We interpret these results such that VTA glutamatergic inputs to LHb report aversive stimuli to LHb, possibly related to current salient aversive experience without regard to prior stress history. Nevertheless, VTA glutamatergic input to the LHb plays an important role in regulating LHb-mediated social and nonsocial consequences of uncontrollable stress.

Proceedings of the National Academy of Sciences · Jul 2026

Parabrachial Ntsr1 neurons modulate food intake and anxiety through a projection to the ventromedial hypothalamus (opens in a new tab)

Jordan L. Pauli, Sekun Park, Rachel R. Felix, Richard D. Palmiter

Abstract

The parabrachial nucleus (PBN) is an important hub located in the pons that relays sensory signals from peripheral regions. It is genetically diverse and contains many populations that modulate feeding and responses to threatening situations. A small Ntsr1 -expressing population of neurons was identified that projects selectively to the ventromedial hypothalamus (VMH). The Ntsr1 neurons are scattered throughout the lateral PBN with a cluster of cells along the border to the nucleus of the lateral lemniscus that overlap with Cck and Foxp2 expression. Chemogenetic activation of PBN Ntsr1 neurons results in Fos induction in Nr5a1 (SF1) and Bdnf neurons in the VMH. Activation of PBN Ntsr1 neurons or their terminals in the VMH reduces food intake after fasting and increases anxiety-like behaviors. In anxiogenic feeding assays, activation of PBN Ntsr1 neurons increases latency to feed as well as reducing food intake. Photometry showed that PBN Ntsr1 -neuronal activity increases during anxiogenic situations but is suppressed during food consumption, suggesting a role in threat-induced suppression of feeding. Silencing PBN Ntsr1 neurons with tetanus toxin light-chain increased food intake and reduced anxiety. These findings reveal a genetically defined PBN to VMH circuit that responds to threats and suppresses feeding behavior.

bioRxiv · Jul 2026

Rapidly decreasing phasic dopamine responses precede a hedonic switch during satiation of sodium appetite (opens in a new tab)

Paula Bazzino, Dionne CR Russchen, Alexandra T Keinath, … James E McCutcheon

Abstract

Phasic dopamine signalling updates the value of stimuli and actions. Most empirical support for this critical process involves manipulation of extrinsic stimuli (e.g., reward magnitude, reward omission). Yet interoceptive signals clearly influence motivated behaviour. Sodium depletion generates a sodium appetite where the value of sodium increases. How the value of sodium is updated during ingestion and as animals satiate their need remains unknown. Here, we administered sodium chloride solutions via intraoral delivery and measured appetitive behaviour and dopamine release in sodium replete and deplete rats. Two different concentrations of sodium chloride were used to modulate the rate of repletion for sodium deplete rats. Appetitive behaviour was evoked by infusions only when rats were deplete, and this behavioural motif faded away during the session only when high concentration infusions were delivered. Phasic dopamine release in the nucleus accumbens had a similar pattern. We identified transition points for both behaviour and dopamine in the subgroup of rats that reached satiation and found that transitions were sharp, with dopamine decreasing just before behaviour. Moreover, transitions occurred only after enough sodium was infused to replace that typically lost upon depletion. These findings demonstrate that mesolimbic dopamine dynamically updates the value of taste stimuli based on interoceptive signals that relay satiation.

Nature Communications · Jul 2026

Neural dynamics of temporal interference stimulation monitoring by soft liquid metal interfaces across neural systems (opens in a new tab)

Enji Kim, Wonjung Park, Yeon-Mi Hong, … Jang-Ung Park

Abstract

Neuromodulation is widely employed to enhance neural activity and restore impaired circuitry, yet current methods suffer from invasiveness, limited depth, or poor spatial resolution. Temporal interference stimulation (TIS) has emerged as a non-invasive approach to modulate deep brain regions via interference of high-frequency electric fields, achieving spatial selectivity. Despite its potential, the physiological effects remain unexplored. Here, we present a customized liquid metal-based neural interface to record electrophysiological responses to TIS across diverse neural tissues, from brain organoids to mouse brains. The softness of the interface minimizes invasiveness while ensuring stable access to deep neural regions. Electrophysiological analyses reveal TIS-induced dynamics in neurodevelopment and functional connectivity. Furthermore, we investigated latent neural dynamics, presenting population-level neural activity, to compare responses across models of differing complexity and maturity. By combining soft neural interfaces with multi-scale analyses, this study uncovers how neuromodulation shapes neural dynamics and supports the development of future therapeutic strategies.

bioRxiv · Jul 2026

Ventral tegmental area dopamine neuron activity mediates multi-valent outcomes during decision making under risk of punishment (opens in a new tab)

Wonn S. Pyon, Omar A. Viera-Resto, Mojdeh Faraji, … Barry Setlow

Abstract

Dopamine contributes to reward-related decision making, but its contributions to decision contexts that include explicit punishment are less well understood. To elucidate the role of ventral tegmental area (VTA) dopamine neurons in decision making under risk of punishment, we used fiber photometry to record activity in these neurons during a decision-making task in which rats choose between a small, “safe” reward and a large reward associated with varying probabilities of explicit punishment. Dopamine neuron activity exhibited phasic increases during risky “Wins” (reward without punishment) and phasic decreases during risky “Losses” (reward plus punishment), each of which scaled with punishment probability and intensity. Further analyses revealed that this outcome-evoked activity predicted choices on subsequent trials. To determine whether VTA dopamine neuron activity plays a causal role in these risk-based decisions, we used optogenetics to selectively inhibit these neurons during risky Wins and Losses. Inhibition of VTA dopamine neurons during Wins selectively reduced the frequency of risky choices after a Win, whereas inhibition during Losses selectively reduced the frequency of risky choices after a Loss. These data reveal that VTA dopamine neuron activity during outcome receipt is causally related to subsequent decision-making behavior. In addition, the fact that the effects of inhibition on choice behavior were specific to the outcome with which the inhibition was paired suggests that VTA dopamine neuron activity contributes to updating after Wins and Losses independently. Significance Statement Dopamine is implicated in movement, motivation, and learning, and has been strongly linked with substance use and risk-seeking behavior. Despite these associations, it is unclear how the activity of dopamine neurons influences decision making under risk of punishment. To elucidate this, we recorded from ventral tegmental area (VTA) dopamine neurons and found that their activity at the population level integrates reward alongside the probability and intensity of punishment experienced during risky outcomes. Further, inhibition of VTA dopamine neuron activity during risky outcomes decreased risk-seeking behavior in an outcome-specific manner. Our findings align with models suggesting that VTA dopamine neurons signal prediction errors, and provide insight into the role of these neurons in adaptive decision making.

bioRxiv · Jul 2026

Spatially resolved cellular and circuit architecture of the insular cortex controlling different dimensions of pain (opens in a new tab)

Guoguang Xie, Meng Wang, Yiqiong Liu, Yi Zhang

Abstract

Chronic pain is a leading cause of human suffering, affecting about 20% of the population. The insular cortex (IC) is a central hub for the multidimensional experience of pain, yet how the diverse neurons in IC are organized and assembled into functional circuits remains unclear. Here, combining multiplexed error-robust fluorescence in situ hybridization (MERFISH), neural tracing and in vivo functional analyses, we resolve the molecular, cellular and circuit architecture of the IC. We find that neuronal projections are specified by both transcriptomic identity and spatial topography. We further show that three molecularly defined neuron types in the posterior IC form discrete brain-wide networks that differentially regulate pain. Layer 5 pyramidal tract (PT) neurons regulate mechanical, thermal and affective pain. In contrast, layer 5 intratelencephalic (IT) neurons selectively modulate thermal nociception, whereas layer 6 corticothalamic (CT) neurons surprisingly relieve negative pain affects. Together, these findings reveal the spatially resolved cellular and circuit organization of the IC governing different dimensions of pain and uncover targets for precision pain therapy.

bioRxiv · Jul 2026

Safety of Subdural Direct Current Stimulation: A Histological Study in the Ovine Brain Using Metal Electrodes (opens in a new tab)

Michael Brosch, Hiroyuki Oya, Katherine N. Gibson-Corley, … Kirill V. Nourski

Abstract

Background Direct current (DC) stimulation can modulate neuronal activity in ways that differ from pulsatile stimulation, but its intracranial use has been limited by concerns about tissue injury at the electrode/tissue interface. Quantitative safety limits for DC delivered through metal electrodes directly to the brain remain poorly defined. Objective To estimate histological safety boundaries for DC stimulation delivered through metal electrodes in a large-brain gyrencephalic animal model. Methods Cathodal DC stimulation was applied to the exposed cortical surface of ten anesthetized sheep using platinum–iridium disc electrodes typically used in clinical applications (surface area ≤ 4.15 mm 2 ). Currents of 5 to 1000 µA were delivered for 10 to 15 minutes at 36 cortical sites. Stimulation dose was quantified as charge density. Brains were removed shortly after stimulation and examined histologically for tissue damage, including necrosis, inflammation, gliosis, and demyelination. Lesion volumes were quantified and related to charge density. Results No lesions were observed at sites where no current or a low charge density (0.7 mC/mm 2 ) was delivered. With stimulation, lesion probability and volume increased with charge density, although variability was substantial. Lesions occurred in 3 of 18 sites at lower charge densities (1.4 to 10 mC/mm 2 ) and in 5 of 9 sites at higher charge densities (14.4 to 144.4 mC/mm 2 ). Linear regression of lesion volume against charge density yielded an estimated zero-lesion intercept of 2.3 mC/mm 2 , whereas alternative nonlinear models predicted thresholds up to 8.7 mC/mm 2 . Conclusion These findings suggest that it may be possible to apply cathodal DC stimulation directly to the cortical surface through metal electrodes without detectable histological damage when current intensity, duration, and electrode size are appropriately constrained. These findings provide quantitative guidance for the safe application of DC directly to neural tissue in experimental and translational neuromodulation studies.