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OpenSorter

Used in 25 published studies →

OpenSorter is a stand-alone package for sorting neural spike data and is the latest addition to TDT’s OpenEx software suite. OpenSorter offers a number of powerful sorting methods including Bayesian expectation-maximization, k-means, and closest-centers algorithms in addition to manual cluster cutting and waveform selection.

Capabilities include manual, semi-automated, and fully automated processing. Spikes can be sorted as individual channels, batched for fast processing of groups of datasets, or combined across blocks or channels and sorted as a pooled superset.

Research Uses

Resources

Publications

  • High channel count neurophysiology
  • Electrical, optogenetic stimulation
  • Ephys of navigation

25 published studies used the OpenSorter. The newest:

Science Advances · Sep 2026

Thalamofrontal synaptic weakening underlies short-term memory deficits from adolescent NMDAR hypofunction. (opens in a new tab)

Jinseon Yu, In Sun Choi, Gyu Hyun Kim, … Jong-Cheol Rah

Abstract

Thalamofrontal (TF) dysconnectivity is one of the most consistent circuit-level abnormalities reported in patients with schizophrenia and is linked to deficits in short-term memory (STM). However, the biological mechanisms underlying TF weakening remain unclear. Here, we show that repeated adolescent N -methyl-d-aspartate receptor (NMDAR) antagonism produces STM deficits by impairing TF synaptic transmission. In mice repeatedly exposed to ketamine, STM impairment coincided with reduced release probability and attenuated short-term depression at mediodorsal thalamus (MD) → dorsomedial prefrontal cortex (dmPFC) synapses, without detectable changes in corticocortical synaptic release probabilit…

Current Biology · Aug 2026

Exposure to broadband noise during non-REM sleep impairs hippocampal sharp-wave ripples and memory consolidation (opens in a new tab)

Karla Salgado-Puga, Utku Kaya, Gideon Rothschild

Abstract

Sleep is critical for consolidating recent experiences into memories. A key mechanism underlying this process is hippocampal sharp-wave ripples (SWRs). Although SWR-dependent memory consolidation is often viewed as an "offline" process, sounds heard during sleep are processed by a highly active auditory system that projects to medial temporal lobe structures, providing a pathway by which sounds may modulate hippocampal activity. While processing salient sounds during sleep can be adaptive, whether ongoing processing of environmental sounds interferes with SWR-dependent memory consolidation remains unknown. To address this question, we recorded neural activity in the CA1 region of the hippocampus in sleeping rats and used a closed-loop system to deliver non-waking broadband noise (BBN) stimuli during or outside of SWRs. We found that BBN suppressed ripple power and reduced SWR rates. BBN delivered during SWRs (On-SWR) produced a greater reduction in ripple power than BBN delivered outside SWRs (Off-SWR). This suppression was accompanied by substantial changes in SWR-associated spiking. We next tested the influence of BBN on memory consolidation using a conditioned place preference paradigm. On-SWR BBN presentation during post-learning sleep abolished memory retention 24 h after learning while sparing memory immediately after sleep. By contrast, Off-SWR BBN weakened memory at both time points. Notably, On-SWR BBN induced a significantly larger impairment in memory 24 h after learning as compared with Off-SWR BBN. These findings suggest that exposure to noise during sleep disrupts hippocampal activity and impairs memory consolidation in a manner that depends on the timing of sounds relative to SWRs.

Read all 25 papers →

How to cite the OpenSorter

Name the model in your Methods so readers can find the equipment you used, for example:

OpenSorter (Tucker-Davis Technologies, Alachua, FL, USA)

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Sort, Edit & Reassign Data

OpenSorter

Data is displayed and can be sorted in principal components feature space, waveform parameter feature space, an event timeline, or piled waveform shape windows. Sorting results can be edited and spikes re-assigned using feature or waveform space editors. Post-hoc analyses including Pseudo-F, isolation distances, L-ratios, and silhouette indices indicate sort quality and help to guide manual resorting and editing.